FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005072942

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005072942
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9513126
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG253360.26632675736661116No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTAAA10155.6958594E-47.81165031
GTCGCAC20100.0095804065.9738894145
CCGAAAA32751.7262209E-95.94249151
GCCTAAC23355.0426643E-65.86521
GGGGGTT115400.05.7412623
GCGGGTT30603.043906E-65.18223861
AGGGGGG149100.05.1727591
GGGTTTA43952.3337634E-95.0796644
Produced by FastQC (version 0.11.5)