FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005072943

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005072943
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8965010
Sequences flagged as poor quality0
Sequence length35-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTTGCG13209.895064E-48.358312145
GGATCGG20201.9711815E-57.6466136145
GGGTCGG41306.2482286E-96.411412145
GGGGGGG689400.05.7773466145
TCGCGCT22901.4525645E-45.3352882
Produced by FastQC (version 0.11.5)