FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005072944

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005072944
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8965010
Sequences flagged as poor quality0
Sequence length35-151
%GC46

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG138660.15466798140771734No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGACG10600.00122203819.404733145
AACGTAC12650.00606022787.8806453145
GCGACAC18500.00347351426.586137145
CCGTGCG28552.654028E-45.819624145
GTCGCCG32900.0017803475.0501604145
Produced by FastQC (version 0.11.5)