FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005072947

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005072947
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9678976
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGGAT14450.0033855386.0016891
GTTCGAC14800.00442007145.85975741
AATCGGG16400.00221378855.72430565
CTTAAAT80150.05.50030041
GTTTAAT68700.05.3650471
GCTAAAT45752.1282176E-105.2129421
GTTTTTT186850.05.14420941
GTTAATT58000.05.1087651
GTTTAGG41351.3142198E-85.06853631
GTTAAAT71600.05.04681161
GTGAAAT104550.05.04613541
GGCTAAC30151.2155446E-55.0337551
Produced by FastQC (version 0.11.5)