FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005072954

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005072954
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5854961
Sequences flagged as poor quality0
Sequence length35-151
%GC46

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60610.10351904991339822No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCTAGC7000.00685080210.857517145
GTCGCGG17900.00303078986.6722174145
TGCGCCG22909.1251294E-46.163656145
TGCGGCG29800.00366030755.100847145
Produced by FastQC (version 0.11.5)