Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005072968 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8016240 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-151 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 9980 | 0.12449727054080217 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTTTCGT | 1425 | 4.09137E-4 | 6.585866 | 1 |
GTAAAAT | 8325 | 0.0 | 6.1568494 | 1 |
GTTAAAT | 5585 | 0.0 | 5.5581427 | 1 |
TGTCGAT | 2350 | 0.008776299 | 5.5073004 | 145 |
GTTTATT | 8220 | 0.0 | 5.4450803 | 1 |
CTTAAAT | 6075 | 0.0 | 5.2286654 | 1 |