FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005072980

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005072980
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9337577
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG318760.34137335627861487No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATATCGG11450.00273289838.608494145
GCGAAAT21952.475099E-76.57587671
AGGGGGG280750.06.55508951
GCGGTTT22353.431469E-76.4581881
CGGTAAA16550.00250621655.66489032
GCGGGTT33151.3698809E-85.66041141
CGACACC46953.660638E-65.131889145
Produced by FastQC (version 0.11.5)