FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005072981

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005072981
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4571774
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAGAT14404.8314518E-46.49627731
GTCAATT21904.343512E-45.25726131
GTTTAAG25059.8143195E-55.17068961
GTGAAAT51851.0913936E-115.1349551
GTTAAAC19950.0041495555.0497381
Produced by FastQC (version 0.11.5)