FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073009

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073009
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9505380
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCGATA14600.00391257935.92432072
GCCGATT15200.00606458775.69502071
GTTAAAT86100.05.44587761
CGAATCC19956.9498323E-45.419523
GTTTTTT211650.05.2147181
GTTAGAC22556.342071E-45.11836241
Produced by FastQC (version 0.11.5)