Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005073024 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11120144 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-151 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 23521 | 0.21151704510301303 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCTAAAC | 3690 | 1.2732926E-10 | 5.876947 | 1 |
GCGGTTT | 2720 | 3.0037882E-7 | 5.8466973 | 1 |
GTTTCGG | 2560 | 2.2547394E-5 | 5.3650093 | 1 |
GCTTTAC | 5740 | 1.8189894E-12 | 5.0373826 | 1 |
GTTTACT | 6505 | 0.0 | 5.0005994 | 1 |