FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073041

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073041
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8900443
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGAAAT17002.3283064E-108.9223081
GTTTTTT157000.06.25671151
TACCGTT15350.00674949965.64016069
GTTTATT86500.05.34405231
GTTAATT48757.2759576E-125.33377551
GTGAAAC68300.05.28757051
AATCTAA52903.6379788E-125.18407155
GTTTTGA83100.05.04119871
Produced by FastQC (version 0.11.5)