FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073049

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073049
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10981633
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGATCGG29108.485422E-76.9381366145
GTTTTTT217950.05.70703551
GTTTTCG25600.0023482035.695957145
AAAATCG30851.143344E-75.5889873
GTTTTAT134450.05.45457271
CTTAAAT93350.05.31442261
GGGGGGG918050.05.217049145
Produced by FastQC (version 0.11.5)