FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073095

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073095
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8909593
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTAAA97600.06.21234231
GGCGAAT16450.00230783465.70431331
GCCTAAA42402.5465852E-115.61789941
GGTAAAT63000.05.3849691
GTTTGAA94850.05.17484661
GTCACGT26955.4109958E-55.0888631
GTTCATT82950.05.0470491
Produced by FastQC (version 0.11.5)