FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073097

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073097
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6430264
Sequences flagged as poor quality0
Sequence length35-151
%GC55

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCTATA15000.00519098575.7754681
TCGTGCG21150.0055275695.742744145
AAGGTAT35852.2578466E-55.3643003145
GTTTTTT89900.05.1394591
GCCTATT21100.00143785755.13222841
GTGAATT40809.7061275E-95.13138961
GTTTAAA43651.8280844E-95.12713341
Produced by FastQC (version 0.11.5)