FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073099

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073099
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7464392
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAAAT79800.06.244211
GTTAAAT55200.06.0179691
GTAAAAT80250.05.939231
GTTAGTT27955.1827374E-75.6842361
AATCTAT40751.7262209E-95.3120365
TTAATCT53701.8189894E-125.24031833
GTTTAAT57551.8189894E-125.01933151
Produced by FastQC (version 0.11.5)