FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073105

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073105
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9286380
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGAAAT16704.159424E-46.05701161
GTTAAAT72700.05.4660691
CTTAACT51601.8189894E-125.3208471
GCCAAAT68050.05.30870631
CGTTTTA19300.00263634235.2368634
GTTAGAT29006.0363363E-65.2320051
GTTTAAA93950.05.1525811
AATCTAG39252.0756488E-85.15011025
Produced by FastQC (version 0.11.5)