FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073115

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073115
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6843826
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAAAT46001.0913936E-115.44832041
GGGGGGG608250.05.3380833145
GTCTAAG21653.9586422E-45.2919351
GCCTAGT19050.00248001935.26241971
CGGGGGG143800.05.2611737145
Produced by FastQC (version 0.11.5)