FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073122

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073122
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8988901
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG139640.15534713309224343No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGCTT30301.0678886E-45.799733145
CCGGATT16850.00307719625.56771952
GCCGAAA23401.8685541E-45.2463791
AGGGGGG166900.05.0623961
Produced by FastQC (version 0.11.5)