FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073164

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073164
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5969255
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACGG6550.005732458611.120844145
GTTTGAC34307.712515E-105.90340231
AATCGAA17557.9408044E-45.7585085
GTTAAAA64350.05.2818711
GTTTTAC36108.8402885E-85.20840361
GTTCAGT37503.770583E-85.2068011
GCTAAAT32451.6026988E-65.12568141
Produced by FastQC (version 0.11.5)