FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073172

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073172
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8607839
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG93930.10912146474858556No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCGGT17200.0038974595.45753961
CGAGATC34401.8176797E-75.24241922
GCCTAAT23852.4870498E-45.1468621
GTTAAGT33002.2998229E-65.03264051
Produced by FastQC (version 0.11.5)