Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005073188 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 13994968 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-151 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 73770 | 0.5271180327100426 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGGGGGG | 23000 | 0.0 | 8.928281 | 1 |
GGGGGTT | 19260 | 0.0 | 7.3253183 | 3 |
GCGAAAT | 2410 | 1.367589E-6 | 5.9794846 | 1 |
GCGAGTT | 2860 | 1.3843237E-7 | 5.794455 | 1 |
GACTCGT | 2820 | 0.0012146945 | 5.569146 | 145 |
GGGGTTA | 6510 | 0.0 | 5.5286865 | 4 |
GGGGTTT | 18075 | 0.0 | 5.4161854 | 4 |
GCGAAAA | 3480 | 4.2382453E-8 | 5.3832545 | 1 |
GCGGGTT | 3760 | 7.799827E-9 | 5.3656335 | 1 |