FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073193

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073193
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6957476
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGCTA12950.0074240016.1230717
CAATATA44900.05.94170434
GTTTGAC41056.366463E-115.6249321
CGAAATC16900.00322115125.54621462
GCTTAAC18500.00155796155.4605551
GTTTAGA34001.4045509E-75.3056861
GTTTAAT54101.8189894E-125.201731
ATATAGC25009.220968E-55.1913696
GGGGGGG647150.05.0583997145
GCCAAGT66150.05.01774361
Produced by FastQC (version 0.11.5)