FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073194

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073194
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6957476
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG71840.10325583588071305No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCGGAA16002.442321E-46.31222631
GGTTTAC27500.00123150625.5629354145
GTTAGGT18900.00204605525.34368371
GTTAGAT22305.4159184E-45.1759451
GTCAAAA62600.05.07052371
Produced by FastQC (version 0.11.5)