FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073206

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073206
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6158594
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG71890.11673118896943036No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGATCG9450.00506091449.370134145
AGAGCGG52600.07.1545258145
GCGTCGG30001.233767E-56.272134145
AGCGCGG48604.9149094E-95.921404145
GATCTAT26100.00345698585.513032145
CTGACGC28000.0078918675.138933145
Produced by FastQC (version 0.11.5)