FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073209

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073209
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7076007
Sequences flagged as poor quality0
Sequence length35-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGTCG9450.00403918569.62989145
GGATCGG19106.339906E-89.529054145
GCGGCGG71200.05.7515597145
CCGCATT15550.0082749695.53687431
CGGATGC24800.0088302745.5041814145
GGGGGGG476250.05.469702145
GGGGGCG80757.2759576E-125.2122154145
GCACGAT18300.0086877595.09689951
Produced by FastQC (version 0.11.5)