FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7076007
Sequences flagged as poor quality0
Sequence length35-151
%GC45

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG127260.17984719348073003No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTT7850.00922432510.430868145
CCTTGCG21900.00161818416.4095745145
GCCGAAT12700.00624410536.22609421
CCTAGCC28006.510254E-45.8487363145
AGGGGGG129900.05.5890621
Produced by FastQC (version 0.11.5)