FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073224

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073224
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8622125
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG135770.15746698174753904No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTTAAA14400.00327324566.01982741
GCGAGAC31701.0317981E-65.24123761
GTGAAAC71900.05.12396961
Produced by FastQC (version 0.11.5)