FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073252

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073252
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9219294
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG382360.4147389160167796No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTAAA8800.00120167188.1960411
AGGGGGG157650.05.81027271
GTTAGCT32555.5360942E-85.53956651
GGGGGTT119750.05.47546633
GTTTAGA50605.456968E-125.2739741
GGGGTTA44807.0940587E-105.146964
Produced by FastQC (version 0.11.5)