FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073269

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073269
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5946422
Sequences flagged as poor quality0
Sequence length35-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTGCGGG17000.00169206697.051815145
GATCGGA14200.0029058916.0841981
GGGGGGG484900.05.933472145
TGCGTTC17400.00462338845.3789472
TGGCCCG51501.4924808E-75.290417145
CGGTGGG41601.39946205E-55.239548145
CGCTTCC32050.00156021975.1005893145
Produced by FastQC (version 0.11.5)