FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8059025
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG99250.12315385546018283No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATTCGC12657.880779E-46.8299025
GTTCGAG25452.1399866E-55.3817831
GCTAGCT25852.7741087E-55.2985061
Produced by FastQC (version 0.11.5)