FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073292

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073292
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7157637
Sequences flagged as poor quality0
Sequence length35-151
%GC46

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG76540.1069347327896064No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCGGG14903.2153423E-48.238412145
ATCGATG17900.0022720416.8576727145
CGCGATC11850.00292707286.69457242
CGATCTT18050.00116428245.587764
AAGCGCC26850.0043859515.403015145
CTCGAAT24105.087247E-55.39053961
GCGATCT23602.1854526E-45.19162133
Produced by FastQC (version 0.11.5)