FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073305

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073305
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5505403
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC8801.2006282E-49.0229171
GCGATTC10701.11339126E-48.0953273
TCGAGCG9000.00148945238.0197147
GCCTAAT15650.00127147065.99605941
CTTAATT44551.05501385E-105.34691331
GTTTTTT107350.05.3120481
GTTAATT35052.673387E-75.14859721
GTTTTAT65950.05.1442251
Produced by FastQC (version 0.11.5)