FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073365

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073365
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5419662
Sequences flagged as poor quality0
Sequence length35-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGGGGG86950.08.71389145
TGTGTCG11450.00303919788.507867145
GGGGGGG373550.06.983159145
CCGTGCG17300.00218767446.8822465145
AGGGGGG47952.1837877E-75.4175916145
CGCCGCG50305.871443E-75.1644835145
Produced by FastQC (version 0.11.5)