FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073406

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073406
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3647117
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG102770.28178421476470317No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTAGG12400.00478941576.38661341
ATTAGCC15000.00545978455.74906166
TCTAGGC20351.5542336E-45.65018377
GTAAAAT41252.4901965E-95.2359671
GGGGGTT58550.05.03689672
Produced by FastQC (version 0.11.5)