FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073413

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073413
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4203098
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAGACT14856.8166835E-46.31438881
GTTCACT31402.5236659E-85.74281361
GTCAACT25353.2889857E-65.69070961
GTCAAAA35852.404704E-95.6335641
GTTTAAT34857.3050614E-95.58824441
CCTAATT20701.8823716E-45.5752461
GTTGATT30053.6598976E-75.52074581
GTTTGTT53200.05.42328931
GCACAAT24205.4814827E-55.3650221
CTAAGTT20050.00430093665.0351738
Produced by FastQC (version 0.11.5)