FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073419

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073419
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9932455
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC14607.295122E-56.9255973
TTCCGAT19856.3235505E-45.4577672
GTTAAAT89400.05.41301251
ATCGCCC32254.3135817E-45.2599506145
Produced by FastQC (version 0.11.5)