FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073425

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073425
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4616490
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCATAT20704.31614E-66.2839211
GTTGCAA24701.2447248E-55.55885271
GGGTCCG26100.00583923655.2729145
GTTTGAT38808.371899E-85.0287561
AAATTTC60550.05.0103814
Produced by FastQC (version 0.11.5)