FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073440

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073440
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4797272
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG88210.18387533581585536No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTAAC18754.4437053E-56.16130921
GTTTAAA49250.06.01079561
GTTTAGT17900.00101786715.647151
GTGAAAT46757.2759576E-115.25111631
GTTCACT34702.14397E-75.2019341
GTTAAAT37554.0296072E-85.1916831
Produced by FastQC (version 0.11.5)