FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073472

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073472
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6842585
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATCGG9450.00488058769.411525145
ACGAATT14502.4964666E-48.433863145
GCGTCGG30052.861998E-87.399244145
CGCGTCG19559.900984E-57.3926206145
AGCGTCG24200.0086805245.5127425145
AGCTCGG51505.502934E-75.1809077145
Produced by FastQC (version 0.11.5)