FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073473

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073473
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5477781
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCGCT8550.0084750987.5908521
GTTAAAT48850.06.3477241
GTTAATT40251.8189894E-126.0915411
GGGAAAT56150.05.90775061
GTAAAAT71400.05.65592861
GGAAAAT100900.05.64611961
GTCAAAC32352.8366412E-75.3499661
AACTAAG25852.7752743E-55.2982526
GTGAATT49401.2732926E-115.25520471
GTTGAGT28905.866472E-65.24005171
GTTAGAA33154.6996865E-75.2208571
Produced by FastQC (version 0.11.5)