FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073485

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073485
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9558817
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCGAT13752.648348E-46.8248051
GTGAAAT105700.05.8048841
GTTCAAT53000.05.44795751
GCGAAAT17400.0044827935.3931651
CTAAATT67450.05.35103371
GTTTTTT185800.05.28375631
GTTAATT61500.05.28186131
GTCAAAT67400.05.1408031
GTTTTAT116350.05.08741431
GGGGGGG778900.05.076344145
GTAAAAT107900.05.0175241
Produced by FastQC (version 0.11.5)