FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073493

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073493
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4540332
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACACG14700.0059118826.9655547145
ATCTAAC14900.00489763875.80572846
GCCTTAT20301.434489E-45.68192151
GGGGGGG387050.05.185159145
CCATCCG26200.0090132015.080601145
Produced by FastQC (version 0.11.5)