FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073501

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073501
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8545920
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTCAC82200.05.61822271
GCCTAAT26103.2017742E-55.25295731
GTTTAAG48203.274181E-115.2397651
GCTTCGC32001.2705113E-65.1864321
GCCTAGC35802.9402543E-45.0892053145
Produced by FastQC (version 0.11.5)