FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073537

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073537
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9139753
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTAAAC26058.690349E-75.8136631
GTTTAAT69600.05.69890981
GTTAAAT67650.05.64997341
GGGGGGG725350.05.4679394145
GTTCAAT46401.0913936E-115.4398681
GTTTTTT177600.05.197631
GTTTAGC29207.0749084E-65.18650441
GTTAAAC38206.1496394E-85.0972831
GTCAAAT55251.8189894E-125.09061961
GCTTAAC24403.5560853E-45.0245531
Produced by FastQC (version 0.11.5)