Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005073569 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3517038 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-151 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCACGT | 1100 | 0.0013451943 | 7.2062106 | 1 |
TCACGTT | 1295 | 0.0074462458 | 6.1211047 | 2 |
ACCCACG | 1790 | 0.0010429239 | 5.6362224 | 6 |
GTAAAAC | 2455 | 6.980314E-5 | 5.2835755 | 1 |
CTCAAAT | 3010 | 2.233146E-6 | 5.2669973 | 1 |
GTTCAAT | 1925 | 0.002609514 | 5.2408795 | 1 |
TTTTAGC | 2635 | 3.829098E-5 | 5.1962023 | 6 |