FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073570

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073570
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3517038
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG61870.1759150739912392No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTAAGT12750.00630593536.21998451
GCCTAAA15309.828262E-46.12574241
GCTAAAC13000.00771257476.100371
GCTTAGA14750.0043715.8653781
GTTAAAC15200.00610047165.69173241
GCTAATT23603.7061294E-55.4987921
GTTTACT20359.034308E-45.3141481
CCAATCC23552.1558037E-45.1961153
GTCTGAT21050.00141790395.13743071
Produced by FastQC (version 0.11.5)