FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073575

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073575
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5848097
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC10200.019.8054521
CCGATCT15400.013.5863922
GTTCGAG16200.00193318285.7896891
GTTTAAT44353.6379788E-125.6937881
GTTTTAT72050.05.40737721
GTTAGGA22606.526289E-45.1078541
GTTAGAG24203.1259825E-45.06827831
Produced by FastQC (version 0.11.5)