FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073610

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073610
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9257276
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG257640.2783108119494331No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTTGCC34003.1568252E-55.5546937145
GTCTCGA29809.970307E-65.0892621
ATCTTCG31450.00200910075.0042286145
Produced by FastQC (version 0.11.5)