FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073685

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073685
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8727048
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC13803.4411496E-57.33210231
GGTAGCG28106.782025E-55.984739145
CCGATCT20903.3430635E-55.87854432
TGTCGGG38657.296978E-65.438912145
GTTTAGA51203.45608E-115.0817361
Produced by FastQC (version 0.11.5)