FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005073703

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005073703
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11786167
Sequences flagged as poor quality0
Sequence length35-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC16750.010.7256691
CCGATCT27953.0195224E-106.6848072
GGATCGG31052.0512438E-56.0688677145
GGGATCG33701.1346661E-55.9205623145
TTCCGAT22757.577706E-45.05400752
Produced by FastQC (version 0.11.5)